Fitness data for ABIE53_005852 in Paraburkholderia graminis OAS925

DNA-binding transcriptional LysR family regulator
SEED: Transcriptional regulator, LysR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
biofilm biofilm; planktonic cells from 96 well plate assay in R2A -0.5 -2.9 compare
carbon source L-Lactate (C) -0.5 -2.8 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -2.3 compare
stress RCH2_defined_glucose_5mM with Adenine 4 mM -0.5 -2.6 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.4 -2.1 compare
r2a outgrowth control R2A outgrowth control -0.4 -3.2 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -1.8 compare
phage Burk2_10 -0.4 -2.4 compare
phage Burk1_10 -0.4 -2.4 compare
carbon source D,L-Malic Acid (C) -0.4 -2.1 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -1.7 compare
r2a outgrowth control R2A outgrowth control +0.3 +2.0 compare
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +1.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +1.8 compare
carbon source Shikimic Acid 5 mM (C) +0.4 +1.6 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +1.4 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +1.3 compare
plant outgrowth control Plant outgrowth control +0.4 +2.0 compare
stress RCH2_defined_glucose_5mM with Adenine 5 mM +0.5 +2.8 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +2.2 compare