Fitness data for ABIE53_005683 in Paraburkholderia graminis OAS925

AraC-like DNA-binding protein
SEED: virulence regulating protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.5 -2.1 compare
r2a no shaking R2A no shaking -0.5 -2.7 compare
motility_chemotaxis Motility_chemotaxis, R2A; outer cut -0.4 -1.8 compare
r2a outgrowth control R2A outgrowth control +0.4 +2.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.5 +1.7 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.5 +1.8 compare
carbon source Acetylated xylan 10 g/L (C) +0.5 +2.1 compare
carbon source D-Sorbitol (C) +0.5 +1.7 compare
carbon source Cinnamic and Ethanols +0.5 +2.4 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +2.4 compare
carbon source D,L-Malic Acid (C) +0.5 +2.2 compare
plant outgrowth control Plant outgrowth control +0.5 +2.2 compare
plant outgrowth control Plant outgrowth control +0.5 +1.7 compare
carbon source Shikimic Acid 5 mM (C) +0.5 +2.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +2.1 compare
plant outgrowth control Plant outgrowth control +0.6 +2.6 compare
carbon source Acetylated xylan 10 g/L (C) +0.6 +2.3 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 +3.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 +3.3 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.8 +2.9 compare