Fitness data for ABIE53_005309 in Paraburkholderia graminis OAS925

uncharacterized protein YgbK (DUF1537 family)
SEED: Predicted pyridoxine biosynthesis protein (probably from glycolaldehide)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
stress M9 with Chloride 200 mM -0.6 -2.3 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.6 -2.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -1.7 compare
plant outgrowth control Plant outgrowth control -0.5 -1.8 compare
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM -0.5 -2.5 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -2.7 compare
soil extract Chlorogenic 5 mM in soil extract -0.4 -2.3 compare
stress R2A with Clay 500 g/L -0.4 -2.6 compare
stress Growth in presence of pinene -0.4 -2.3 compare
nitrogen source Ammonium chloride 0.5 mM (N) -0.4 -2.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -2.0 compare
stress R2A with Tricalcium phosphate 0.5 g/L +0.4 +1.9 compare
soil extract Sucrose 5 mM in soil extract +0.4 +2.2 compare
carbon source Acetylated xylan 10 g/L (C) +0.4 +1.6 compare
phage Burk1_100 +0.4 +2.5 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +2.7 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.5 +2.1 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +1.9 compare
plant outgrowth control Plant outgrowth control +0.6 +2.6 compare
stress R2A with Propan-1-ol 13 g/L +0.6 +2.2 compare