Fitness data for ABIE53_005308 in Paraburkholderia graminis OAS925

ribulose-bisphosphate carboxylase large chain
SEED: similar to ribulose-1,5-bisphosphate carboxylase, Type III
KEGG: ribulose-bisphosphate carboxylase large chain

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source L-Fucose (C) -1.0 -3.5 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -1.0 -2.9 compare
carbon source D-Galacturonic Acid (C) -0.7 -3.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -2.6 compare
stress R2A with Tricalcium phosphate 0.5 g/L -0.7 -2.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -2.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -2.0 compare
carbon source Shikimic Acid 5 mM (C) -0.6 -2.3 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -2.3 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -2.7 compare
carbon source D-Glucosamine Hydrochloride (C) -0.6 -1.5 compare
soil extract Adenine 5 mM in soil extract -0.6 -2.5 compare
carbon source Acetylated xylan 10 g/L (C) -0.6 -1.9 compare
carbon source D-Fructose (C) -0.6 -3.0 compare
carbon source D-Lactate (C) -0.6 -2.1 compare
carbon source Ferulic Acid and Ethanols +0.6 +3.5 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 +0.6 +2.7 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 +1.5 compare
stress M9 with Chloride 200 mM +0.7 +3.5 compare
soil extract Indole-3-pyruvic 5 mM in soil extract +0.7 +3.0 compare