Fitness data for ABIE53_005033 in Paraburkholderia graminis OAS925

peptide/nickel transport system permease protein
SEED: Peptide ABC transporter, permease protein
KEGG: peptide/nickel transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source D-Galactose (C) -0.7 -3.3 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.7 -2.9 compare
motility_chemotaxis Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut -0.6 -3.1 compare
carbon source D-Galacturonic Acid (C) -0.6 -3.1 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -2.5 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -2.4 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -3.3 compare
stress R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM -0.5 -2.3 compare
carbon source D-Galactose (C) -0.5 -2.6 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -2.3 compare
m9 no stress control M9 no stress control +0.5 +2.9 compare
stress Growth in presence of pinene +0.5 +2.5 compare
tn7 efficiency Outgrowth after Tn7 transformation +0.5 +2.9 compare
stress R2A with Propan-1-ol 13 g/L +0.5 +2.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.5 +2.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +3.4 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +1.9 compare
plant outgrowth control Plant outgrowth control +0.6 +2.3 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 +4.6 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.2 +5.3 compare