Fitness data for ABIE53_004706 in Paraburkholderia graminis OAS925

2-iminobutanoate/2-iminopropanoate deaminase
SEED: Bona fide RidA/YjgF/TdcF/RutC subgroup

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
plant outgrowth control Plant outgrowth control -1.8 -5.0 compare
carbon source Acetylated xylan 10 g/L (C) -1.1 -2.6 compare
carbon source Shikimic Acid 5 mM (C) -1.0 -2.9 compare
plant outgrowth control Plant outgrowth control -1.0 -3.5 compare
plant outgrowth control Plant outgrowth control -1.0 -3.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.0 -2.9 compare
carbon source Shikimic Acid 5 mM (C) -0.9 -3.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 -2.7 compare
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 -2.7 compare
r2a outgrowth control R2A outgrowth control -0.9 -3.8 compare
plant outgrowth control Plant outgrowth control -0.9 -2.5 compare
carbon source Ferulic Acid and Ethanols -0.8 -3.9 compare
carbon source Cinnamic and Ethanols -0.8 -3.3 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 -2.0 compare
carbon source Inosine (C) -0.7 -3.1 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -2.3 compare
r2a outgrowth control R2A outgrowth control -0.7 -3.3 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -1.8 compare
soil extract Sucrose 5 mM in soil extract -0.7 -2.9 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 +2.2 compare