Fitness data for ABIE53_004704 in Paraburkholderia graminis OAS925

two-component system capsular synthesis sensor histidine kinase RcsC
SEED: Sensory box histidine kinase/response regulator
KEGG: two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.3 -2.1 compare
in planta Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.3 -2.0 compare
stress R2A with Quartz_sand 500 g/L +0.3 +1.9 compare
carbon source D-Mannose (C) +0.3 +1.5 compare
r2a shaking control R2A shaking control +0.3 +2.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.3 +1.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +1.9 compare
motility_chemotaxis Motility_chemotaxis, R2A; inner cut +0.3 +2.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +1.9 compare
carbon source Azelaic 20 mM (C) +0.3 +2.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +1.6 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +1.8 compare
stress R2A with N-decanoyl-DL-Homoserine lactone 10 uM +0.3 +2.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.3 +1.8 compare
carbon source D-Sorbitol (C) +0.3 +2.3 compare
carbon source Acetylated xylan 10 g/L (C) +0.3 +2.3 compare
carbon source Azelaic 20 mM (C) +0.3 +2.4 compare
stress R2A with Quartz_sand 500 g/L +0.3 +2.4 compare
motility_chemotaxis Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut +0.3 +2.3 compare
carbon source D-Gluconic Acid (C) +0.4 +2.1 compare