Fitness data for ABIE53_004659 in Paraburkholderia graminis OAS925

RNA polymerase sigma-70 factor (TIGR02943 family)
SEED: DNA-directed RNA polymerase specialized sigma subunit, sigma24-like
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -3.2 compare
carbon source D-Lactate (C) -0.6 -2.8 compare
carbon source L-Proline (C) -0.5 -2.2 compare
stress R2A with Propan-1-ol 13 g/L -0.5 -2.3 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -2.4 compare
carbon source Beta-Lactose (C) -0.5 -2.4 compare
stress R2A with Ethanol 2.5 vol% -0.4 -1.9 compare
carbon source D-Sorbitol (C) -0.4 -1.8 compare
stress R2A with 3-methyl-3-butenol 4.5 g/L -0.4 -2.2 compare
stress RCH2_defined_glucose_5mM with Abietic Acid 5 mM -0.4 -1.9 compare
r2a outgrowth control R2A outgrowth control +0.4 +1.8 compare
plant outgrowth control Plant outgrowth control +0.4 +2.5 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.4 +2.3 compare
carbon source Indole-3-pyruvic and Ethanols +0.4 +2.9 compare
plant outgrowth control Plant outgrowth control +0.4 +1.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +3.2 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +2.5 compare
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +2.2 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 +3.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.8 +3.2 compare