Fitness data for ABIE53_004646 in Paraburkholderia graminis OAS925

squalene-hopene/tetraprenyl-beta-curcumene cyclase
SEED: Squalene--hopene cyclase (EC 5.4.99.17)
KEGG: squalene-hopene cyclase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.4)


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group condition fitness t score  
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM -4.0 -13.5 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.9 -13.2 compare
stress RCH2_defined_glucose_5mM with Cinnamic 5 mM -3.9 -10.4 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.8 -13.9 compare
stress RCH2_defined_glucose_5mM with Cinnamic 5 mM -3.8 -12.8 compare
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM -3.8 -11.1 compare
stress R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM -3.6 -10.2 compare
stress RCH2_defined_glucose_5mM with Salicylic 5 mM -3.3 -14.4 compare
stress R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM -3.1 -7.3 compare
stress R2A with 3-methyl-3-butenol 4.5 g/L -3.1 -16.1 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.1 -10.9 compare
stress R2A with Propan-1-ol 13 g/L -2.9 -14.5 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.7 -15.0 compare
stress R2A with 3-methyl-3-butenol 4.5 g/L -2.7 -15.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.6 -13.0 compare
carbon source Acetylated xylan 10 g/L (C) -2.6 -13.7 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.6 -14.7 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -2.6 -10.6 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.5 -10.2 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -2.4 -13.4 compare