Fitness data for ABIE53_004579 in Paraburkholderia graminis OAS925

RNA polymerase sigma factor (sigma-70 family)
SEED: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.8 -4.0 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -2.1 compare
stress RCH2_defined_glucose_5mM with Shikimic Acid 5 mM -0.4 -2.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.4 -1.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -1.8 compare
soil extract Adenine 5 mM in soil extract -0.3 -1.7 compare
nitrogen source 1-aminocyclopropane-1-carboxylate (ACC) (N) -0.3 -2.3 compare
plant outgrowth control Plant outgrowth control -0.3 -1.6 compare
stress Growth in presence of pinene +0.3 +1.7 compare
stress R2A with N-decanoyl-DL-Homoserine lactone 10 uM +0.3 +1.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +1.7 compare
carbon source shik 20mM +0.3 +2.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +2.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +2.0 compare
carbon source Acetylated xylan 10 g/L (C) +0.4 +2.2 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +2.0 compare
carbon source L-Histidine (C) +0.4 +2.0 compare
carbon source D-Glucose (C) +0.4 +2.3 compare
carbon source D,L-Malic Acid (C) +0.5 +2.6 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +2.3 compare