Fitness data for ABIE53_004572 in Paraburkholderia graminis OAS925

GntR family transcriptional regulator/MocR family aminotransferase
SEED: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
KEGG: GntR family transcriptional regulator / MocR family aminotransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source butyrate (C) -0.5 -3.0 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.5 -2.6 compare
carbon source 4-Hydroxybenzoic Acid (C) -0.5 -3.0 compare
carbon source D-Raffinose (C) -0.5 -3.3 compare
carbon source D-Lactate (C) -0.5 -2.9 compare
carbon source L-Asparagine (C) -0.5 -3.1 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.4 -2.5 compare
carbon source propionate (C) -0.4 -2.9 compare
stress R2A with Isopropyl alcohol 21 g/L -0.4 -2.5 compare
carbon source L-Glutamic (C) -0.4 -3.0 compare
m9 no stress control M9 no stress control -0.4 -2.7 compare
stress RCH2_defined_glucose_5mM with Sucrose 5 mM -0.4 -2.1 compare
stress RCH2_defined_glucose_5mM with Salicylic 5 mM -0.4 -2.4 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +2.4 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +2.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +3.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.5 +2.7 compare
carbon source Acetylated xylan 10 g/L (C) +0.5 +2.8 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +3.7 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +3.1 compare