Fitness data for ABIE53_004438 in Paraburkholderia graminis OAS925

DNA-binding transcriptional LysR family regulator
SEED: LysR family transcriptional regulator clustered with dicarboxylate transport

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.7 -3.1 compare
carbon source 2-Deoxy-D-Ribose (C) -0.5 -2.7 compare
r2a outgrowth control R2A outgrowth control -0.4 -1.9 compare
carbon source L-Threonine (C) -0.4 -1.9 compare
stress R2A with Isopropyl alcohol 21 g/L -0.4 -1.7 compare
stress RCH2_defined_glucose_5mM with Lumazine 5 mM -0.4 -2.0 compare
carbon source succinate (C) -0.4 -2.1 compare
carbon source D-Arabinose (C) -0.4 -1.9 compare
nitrogen source histamine 5mM N source -0.4 -1.7 compare
wm3064 conjugation control LB_DAP agar plate conjugation with WM3064, outgrowth in LB +0.4 +1.9 compare
stress RCH2_defined_glucose_5mM with Epiandrosterone 5 mM +0.4 +2.1 compare
phage Burk1_1 +0.4 +2.2 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +1.7 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +1.5 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +2.0 compare
plant outgrowth control Plant outgrowth control +0.4 +1.8 compare
in planta Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.5 +1.8 compare
carbon source Acetylated xylan 10 g/L (C) +0.5 +1.9 compare
carbon source D-Mannose (C) +0.5 +1.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 +2.9 compare