Fitness data for ABIE53_004292 in Paraburkholderia graminis OAS925

Lrp/AsnC family transcriptional regulator of ectoine degradation
SEED: Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.7 -4.9 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.3 -3.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.1 -3.2 compare
plant outgrowth control Plant outgrowth control -1.1 -2.8 compare
stress R2A with Chloride 200 mM -0.9 -2.3 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 -1.7 compare
soil extract Sucrose 5 mM in soil extract -0.8 -3.0 compare
soil extract Indole-3-pyruvic 5 mM in soil extract -0.7 -1.6 compare
r2a outgrowth control R2A outgrowth control +0.7 +1.9 compare
carbon source D-Glucose (C) +0.7 +1.7 compare
soil extract Adenine 5 mM in soil extract +0.8 +2.2 compare
carbon source m-Inositol (C) +0.8 +1.5 compare
carbon source D-Galacturonic Acid (C) +0.8 +1.4 compare
stress R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM +0.8 +1.8 compare
carbon source D-Glucose (C) +0.9 +1.6 compare
carbon source D-Fructose (C) +0.9 +1.5 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.9 +1.8 compare
wm3064 conjugation control LB_DAP agar plate conjugation with WM3064, outgrowth in LB +0.9 +3.2 compare
carbon source L-Histidine (C) +1.1 +1.8 compare
carbon source D-Mannose (C) +1.2 +2.1 compare