Fitness data for ABIE53_004225 in Paraburkholderia graminis OAS925

mono/diheme cytochrome c family protein
SEED: Sulfite dehydrogenase cytochrome subunit SoxD

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.0 -1.8 compare
carbon source butyrate (C) -1.0 -3.2 compare
phage Burk2_10 -0.7 -2.7 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -2.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -2.1 compare
carbon source D-Fructose (C) -0.6 -2.8 compare
stress M9 with Chloride 200 mM -0.6 -2.2 compare
r2a outgrowth control R2A outgrowth control -0.6 -1.9 compare
stress control RCH2_defined_glucose_5mM with Dimethyl Sulfoxide 1 vol% -0.6 -2.8 compare
soil extract Chlorogenic 5 mM in soil extract -0.6 -2.0 compare
carbon source D-Glucose (C) -0.6 -2.2 compare
soil extract D-Glucose 5 mM in soil extract -0.6 -2.1 compare
pH R2A pH 8.3 -0.6 -2.7 compare
carbon source butyrate (C) -0.6 -1.9 compare
biofilm biofilm; planktonic cells from 96 well plate assay in R2A with C30 compound -0.6 -2.5 compare
phage NP -0.6 -2.3 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.6 +1.6 compare
carbon source D,L-Malic Acid (C) +0.6 +2.3 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.8 +2.8 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.0 +2.5 compare