Fitness data for ABIE53_004223 in Paraburkholderia graminis OAS925

NitT/TauT family transport system substrate-binding protein
SEED: Taurine-binding periplasmic protein TauA
KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 -4.2 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -2.6 compare
nitrogen source Ammonium chloride 0.5 mM (N) -0.6 -3.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.6 -2.5 compare
carbon source Shikimic Acid 5 mM (C) -0.6 -2.8 compare
stress M9 with Chloride 200 mM -0.6 -2.6 compare
motility_chemotaxis Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut -0.5 -2.6 compare
motility_chemotaxis Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut -0.5 -2.1 compare
stress R2A with N-(3-oxohexanoyl)-DL-homoserine lactone 10 uM -0.5 -2.3 compare
stress R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM -0.4 -2.4 compare
r2a no shaking R2A no shaking -0.4 -2.2 compare
r2a shaking control R2A shaking control -0.4 -2.2 compare
carbon source fumaric 20mM -0.4 -2.2 compare
pH R2A pH 8.3 -0.4 -2.3 compare
carbon source fumaric 20mM -0.4 -2.2 compare
stress R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM -0.4 -2.4 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -1.5 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -1.3 compare
motility_chemotaxis Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut -0.4 -2.0 compare
stress RCH2_defined_glucose_5mM with Sucrose 5 mM +0.4 +1.8 compare