Fitness data for ABIE53_004105 in Paraburkholderia graminis OAS925

multidrug efflux system outer membrane protein
SEED: RND efflux system, outer membrane lipoprotein CmeC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
stress R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM -3.7 -7.0 compare
stress R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM -3.6 -4.9 compare
biofilm biofilm; planktonic cells from 96 well plate assay in R2A with C30 compound -2.2 -8.6 compare
biofilm biofilm; planktonic cells from 96 well plate assay in R2A with C30 compound -2.0 -8.2 compare
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM -0.8 -4.5 compare
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM -0.7 -3.6 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.6 -2.8 compare
stress R2A with Quartz_sand 500 g/L -0.5 -3.0 compare
carbon source Laminarin 10 g/L (C) +0.5 +2.6 compare
stress R2A with Tricalcium phosphate 0.5 g/L +0.5 +2.8 compare
soil extract Indole-3-pyruvic 5 mM in soil extract +0.6 +2.8 compare
soil extract Serotonin 5 mM in soil extract +0.6 +2.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +2.8 compare
stress RCH2_defined_glucose_5mM with Serotonin 5 mM +0.6 +3.4 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +2.7 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 +2.7 compare
stress RCH2_defined_glucose_5mM with Pyridoxal 0.5 mM +0.7 +4.1 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.7 +3.0 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.8 +3.8 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.8 +2.4 compare