Fitness data for ABIE53_004075 in Paraburkholderia graminis OAS925

shikimate dehydrogenase
SEED: Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25)
KEGG: shikimate dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
carbon source shik 5mM -5.3 -3.7 compare
carbon source shik 20mM -4.7 -5.6 compare
carbon source shik 5mM -4.7 -6.4 compare
carbon source shik 20mM -4.7 -4.5 compare
soil extract Shikimic Acid 5 mM in soil extract -4.1 -6.9 compare
carbon source Shikimic Acid 5 mM (C) -4.1 -3.9 compare
carbon source Shikimic Acid 5 mM (C) -2.7 -4.4 compare
soil extract Shikimic Acid 5 mM in soil extract -2.5 -4.2 compare
carbon source Shikimic Acid (C) -1.2 -3.6 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.1 -2.5 compare
stress RCH2_defined_glucose_5mM with Chlorogenic 2 mM -1.0 -3.4 compare
carbon source Shikimic Acid (C) -1.0 -4.4 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.9 -2.6 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.9 -2.1 compare
soil extract Chlorogenic 5 mM in soil extract -0.9 -3.6 compare
soil extract Chlorogenic 5 mM in soil extract -0.9 -2.9 compare
plant outgrowth control Plant outgrowth control -0.9 -1.7 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.9 -2.6 compare
carbon source Acetylated xylan 10 g/L (C) -0.9 -2.2 compare
soil extract Indole-3-pyruvic 5 mM in soil extract +0.9 +2.7 compare