Fitness data for ABIE53_004009 in Paraburkholderia graminis OAS925

TetR/AcrR family transcriptional regulator of autoinduction and epiphytic fitness

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
stress RCH2_defined_glucose_5mM with Adenine 5 mM -2.0 -4.0 compare
stress RCH2_defined_glucose_5mM with Lumazine 5 mM -1.6 -3.4 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -1.4 -1.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.3 -2.4 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.3 -2.4 compare
carbon source L-Tryptophan (C) -1.2 -2.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.2 -3.0 compare
stress RCH2_defined_glucose_5mM with 4-Pyridoxic 5 mM -1.2 -3.4 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.1 -3.4 compare
carbon source D-Glucosamine Hydrochloride (C) -1.1 -2.4 compare
stress RCH2_defined_glucose_5mM with Lumazine 5 mM -1.1 -2.3 compare
carbon source Shikimic Acid 5 mM (C) +1.1 +3.3 compare
stress R2A with Salicylic 10 uM +1.1 +3.2 compare
carbon source Azelaic 20 mM (C) +1.1 +3.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +1.1 +2.6 compare
carbon source Acetylated xylan 10 g/L (C) +1.1 +3.6 compare
carbon source Azelaic 20 mM (C) +1.2 +3.0 compare
stress R2A with Quartz_sand 500 g/L +1.2 +2.8 compare
carbon source Shikimic Acid 5 mM (C) +1.3 +5.2 compare
motility_chemotaxis Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut +1.4 +3.6 compare