Fitness data for ABIE53_003968 in Paraburkholderia graminis OAS925

2-iminobutanoate/2-iminopropanoate deaminase
SEED: Bona fide RidA/YjgF/TdcF/RutC subgroup

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


Add gene:

Or see all 488 experiments or choose conditions

group condition fitness t score  
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.8 -3.7 compare
soil extract D,L-Malic Acid 5 mM in soil extract -1.3 -3.4 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.2 -2.3 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -1.2 -1.9 compare
stress RCH2_defined_glucose_5mM with caffeic 1 mM -1.1 -2.8 compare
phage Burk2_10 -1.1 -2.6 compare
r2a outgrowth control R2A outgrowth control -1.0 -2.5 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.0 -1.3 compare
stress RCH2_defined_glucose_5mM with Serotonin 5 mM -0.9 -2.2 compare
soil extract caffeic 5 mM in soil extract -0.9 -1.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.9 -2.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 -2.1 compare
phage Burk1_100 -0.9 -2.9 compare
soil extract Indole-3-pyruvic 5 mM in soil extract -0.9 -2.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 -1.5 compare
carbon source Shikimic Acid 5 mM (C) -0.8 -1.7 compare
stress RCH2_defined_glucose_5mM with Shikimic Acid 5 mM -0.8 -2.4 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.8 -1.6 compare
r2a outgrowth control R2A outgrowth control -0.8 -1.7 compare
motility_chemotaxis Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut +0.8 +3.3 compare