Fitness data for ABIE53_003939 in Paraburkholderia graminis OAS925

type VI secretion system protein ImpB
SEED: Uncharacterized protein ImpB
KEGG: type VI secretion system protein ImpB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
carbon source Acetylated xylan 10 g/L (C) -3.9 -2.3 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -3.3 -1.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.7 -1.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -2.2 -1.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.1 -2.0 compare
carbon source L-Proline (C) -2.0 -1.5 compare
carbon source Shikimic Acid 5 mM (C) -2.0 -1.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.6 -1.5 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.3 -1.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.3 -1.4 compare
stress R2A with Ethanol 2.5 vol% -1.2 -2.1 compare
carbon source L-Phenylalanine (C) -1.1 -1.9 compare
carbon source D-Galactose (C) +1.1 +1.8 compare
carbon source fumaric 20mM +1.1 +3.8 compare
carbon source L-Arginine (C) +1.1 +3.7 compare
carbon source a-Ketoglutaric (C) +1.2 +2.7 compare
carbon source D-Ribose (C) +1.2 +2.9 compare
biofilm biofilm; planktonic cells from 96 well plate assay in R2A +1.2 +2.6 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +2.2 +1.5 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +2.4 +1.6 compare