Fitness data for ABIE53_003924 in Paraburkholderia graminis OAS925

type VI secretion system protein ImpM
SEED: Protein phosphatase ImpM

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.5 -2.2 compare
carbon source shik 5mM +0.4 +2.4 compare
biofilm biofilm; attached cells from 96 well plate assay in R2A +0.4 +2.3 compare
r2a no shaking R2A no shaking +0.4 +1.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +2.4 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +2.0 compare
carbon source shik 5mM +0.4 +2.5 compare
soil extract D-Glucose 5 mM in soil extract +0.4 +2.1 compare
stress RCH2_defined_glucose_5mM with Adenine 4 mM +0.4 +2.4 compare
stress R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM +0.5 +1.9 compare
stress Growth in presence of pinene +0.5 +2.6 compare
carbon source D-Gluconic Acid (C) +0.5 +2.0 compare
carbon source L-Rhamnose (C) +0.5 +2.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +1.7 compare
carbon source D-Galactose (C) +0.5 +1.9 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.5 +1.8 compare
carbon source D-Galacturonic Acid (C) +0.5 +2.4 compare
carbon source Tween 20 (C) +0.6 +2.4 compare
carbon source D-Glucose-6-Phosphate (C) +0.6 +2.5 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.9 +2.9 compare