Fitness data for ABIE53_003880 in Paraburkholderia graminis OAS925

2-keto-3-deoxygluconate permease
SEED: 2-keto-3-deoxygluconate permease (KDG permease)
KEGG: 2-keto-3-deoxygluconate permease

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


Add gene:

Or see all 488 experiments or choose conditions

group condition fitness t score  
carbon source D-Glucuronic Acid (C) -0.7 -3.9 compare
carbon source Tween 20 (C) -0.6 -3.8 compare
nitrogen source histamine 2mM N source -0.5 -3.0 compare
carbon source D-Sorbitol (C) -0.5 -2.9 compare
carbon source D-Raffinose (C) -0.4 -2.9 compare
stress R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM -0.4 -2.6 compare
carbon source L-Proline (C) -0.4 -2.3 compare
carbon source butyrate (C) -0.4 -2.3 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.4 -2.3 compare
nitrogen source Ammonium chloride 0.5 mM (N) -0.4 -2.4 compare
soil extract Serotonin 5 mM in soil extract -0.3 -2.0 compare
carbon source L-Glutamine (C) -0.3 -2.4 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -2.4 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -1.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +1.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +2.4 compare
carbon source Acetylated xylan 10 g/L (C) +0.3 +2.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.4 +1.7 compare
soil extract Indole-3-pyruvic 5 mM in soil extract +0.4 +1.8 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.5 +2.9 compare