Fitness data for ABIE53_003870 in Paraburkholderia graminis OAS925

phosphonate utilization transcriptional regulator
SEED: Predicted regulator PutR for proline utilization, GntR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source D-Fructose (C) -0.8 -2.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -2.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.7 -2.4 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -2.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.7 -3.0 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.7 -2.5 compare
carbon source Azelaic 20 mM (C) -0.6 -2.5 compare
carbon source Cinnamic and Ethanols -0.6 -2.4 compare
stress R2A with N-decanoyl-DL-Homoserine lactone 10 uM -0.5 -2.9 compare
stress R2A with Isopropyl alcohol 21 g/L -0.5 -2.5 compare
carbon source acetate (C) -0.5 -2.7 compare
stress R2A with N-decanoyl-DL-Homoserine lactone 10 uM -0.5 -2.2 compare
plant outgrowth control Plant outgrowth control +0.5 +2.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +1.7 compare
plant outgrowth control Plant outgrowth control +0.5 +2.4 compare
soil extract Chlorogenic 5 mM in soil extract +0.6 +2.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.6 +2.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +2.3 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 +1.6 compare
stress RCH2_defined_glucose_5mM with Chlorogenic 1 mM +0.7 +3.5 compare