Fitness data for ABIE53_003661 in Paraburkholderia graminis OAS925

two-component system OmpR family response regulator
SEED: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source D-Fructose (C) -0.6 -3.1 compare
stress RCH2_defined_glucose_5mM with Adenine 5 mM -0.5 -2.4 compare
nitrogen source histamine 2mM N source -0.5 -2.0 compare
carbon source Shikimic Acid 5 mM (C) +0.5 +3.0 compare
carbon source Acetylated xylan 10 g/L (C) +0.5 +2.9 compare
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +2.5 compare
stress RCH2_defined_glucose_5mM with Lumazine 5 mM +0.5 +2.4 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.5 +1.9 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +2.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +1.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +2.7 compare
plant outgrowth control Plant outgrowth control +0.6 +3.1 compare
carbon source Acetylated xylan 10 g/L (C) +0.6 +3.5 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.6 +2.4 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +2.4 compare
plant outgrowth control Plant outgrowth control +0.7 +4.0 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.7 +2.0 compare
plant outgrowth control Plant outgrowth control +0.8 +3.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.8 +4.4 compare
plant outgrowth control Plant outgrowth control +0.8 +3.8 compare