Fitness data for ABIE53_003579 in Paraburkholderia graminis OAS925

AmpD protein
SEED: N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD
KEGG: AmpD protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 3.7)


Add gene:

Or see all 488 experiments or choose conditions

group condition fitness t score  
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM -4.8 -8.0 compare
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM -4.6 -7.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -4.5 -4.4 compare
stress RCH2_defined_glucose_5mM with Lumazine 5 mM -4.4 -5.2 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -4.2 -2.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -4.2 -2.9 compare
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM -4.2 -8.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -4.2 -2.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -4.1 -2.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -4.0 -2.8 compare
stress RCH2_defined_glucose_5mM with Cinnamic 5 mM -3.9 -9.1 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.9 -8.7 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.9 -5.3 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.8 -4.6 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.8 -2.6 compare
stress RCH2_defined_glucose_5mM with Lumazine 5 mM -3.7 -7.9 compare
stress M9 with 3-methyl-2-butenol 2 g/L +5.0 +23.5 compare
stress M9 with 3-methyl-2-butenol 2 g/L +5.2 +28.4 compare
stress M9 with 3-methyl-2-butenol 2 g/L +5.6 +29.1 compare
stress M9 with 3-methyl-2-butenol 2 g/L +5.7 +26.6 compare