Fitness data for ABIE53_003554 in Paraburkholderia graminis OAS925

L-arabinose transport system substrate-binding protein
SEED: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
KEGG: L-arabinose transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source D-Galactose (C) -2.5 -4.9 compare
carbon source D-Galactose (C) -2.2 -4.4 compare
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 0.5 mM -1.3 -3.5 compare
carbon source L-Proline (C) -1.1 -2.7 compare
carbon source Pectin 10 g/L (C) -1.1 -3.6 compare
stress RCH2_defined_glucose_5mM with 2,3-dihydroxybenzoic 5 mM -1.1 -3.1 compare
stress RCH2_defined_glucose_5mM with Pyridoxal 0.5 mM -0.9 -2.9 compare
stress M9 with Chloride 200 mM -0.8 -2.6 compare
soil extract D-Glucose 5 mM in soil extract -0.8 -2.4 compare
stress control RCH2_defined_glucose_5mM with Dimethyl Sulfoxide 1 vol% -0.8 -3.0 compare
stress RCH2_defined_glucose_5mM with Serotonin 5 mM -0.8 -1.9 compare
stress RCH2_defined_glucose_5mM with 4-Pyridoxic 5 mM -0.7 -2.7 compare
carbon source D-Sorbitol (C) +0.8 +1.7 compare
r2a outgrowth control R2A outgrowth control +0.8 +2.8 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.8 +2.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.9 +1.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.0 +4.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.1 +2.0 compare
carbon source L-Arabinose (C) +1.4 +3.6 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +1.5 +4.3 compare