Fitness data for ABIE53_003286 in Paraburkholderia graminis OAS925

branched-chain amino acid transport system substrate-binding protein
SEED: Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source L-Proline (C) -2.0 -11.3 compare
carbon source L-Proline (C) -1.7 -8.9 compare
soil extract L-Proline 5 mM in soil extract -1.3 -8.6 compare
soil extract L-Proline 5 mM in soil extract -1.2 -8.8 compare
carbon source L-Asparagine (C) -1.1 -7.5 compare
carbon source L-Asparagine (C) -1.0 -6.8 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.9 -5.4 compare
stress RCH2_defined_glucose_5mM with L-Proline 5 mM -0.8 -5.7 compare
stress RCH2_defined_glucose_5mM with L-Proline 5 mM -0.7 -5.2 compare
carbon source L-Tryptophan (C) -0.7 -3.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.7 -4.6 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.7 -4.3 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -3.6 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.6 -3.7 compare
carbon source L-Histidine (C) -0.6 -4.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -4.3 compare
carbon source L-Tryptophan (C) -0.6 -3.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -3.8 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -3.4 compare
carbon source D-Glucose (C) +0.7 +4.6 compare