Fitness data for ABIE53_003023 in Paraburkholderia graminis OAS925

uncharacterized protein YbaP (TraB family)
SEED: putative ligase
KEGG: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 -2.5 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -2.2 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.7 -2.6 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -2.3 compare
stress RCH2_defined_glucose_5mM with Abietic Acid 5 mM -0.6 -2.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.6 -2.3 compare
in planta Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.6 -1.8 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.6 -1.3 compare
carbon source 4-Hydroxybenzoic Acid (C) -0.6 -2.2 compare
carbon source succinate (C) -0.5 -2.1 compare
stress RCH2_defined_glucose_5mM with 4-Pyridoxic 5 mM -0.5 -2.4 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -1.8 compare
carbon source Azelaic 20 mM (C) +0.5 +2.5 compare
soil extract D-Glucose 5 mM in soil extract +0.5 +2.5 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.5 +1.7 compare
stress RCH2_defined_glucose_5mM with 4-Hydroxybenzoic Acid 5 mM +0.5 +2.3 compare
motility_chemotaxis Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut +0.5 +2.0 compare
motility_chemotaxis Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut +0.6 +2.5 compare
biofilm biofilm; attached cells from 96 well plate assay in R2A +0.6 +3.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +2.6 compare