Fitness data for ABIE53_003001 in Paraburkholderia graminis OAS925

RNA-binding protein
SEED: FIG004454: RNA binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.2 -2.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.0 -2.7 compare
motility_chemotaxis Motility_chemotaxis, R2A; outer cut -1.0 -2.9 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 -3.8 compare
soil extract Shikimic Acid 5 mM in soil extract -0.9 -2.8 compare
m9 no stress control M9 no stress control -0.9 -2.6 compare
biofilm biofilm; planktonic cells from 96 well plate assay in R2A with C30 compound -0.8 -2.4 compare
soil extract Sucrose 5 mM in soil extract -0.8 -1.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.8 -3.7 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 -2.6 compare
motility_chemotaxis Motility_chemotaxis, R2A; outer cut -0.7 -2.7 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.7 -1.9 compare
biofilm biofilm; planktonic cells from 96 well plate assay in R2A -0.7 -2.1 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.7 -1.7 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.7 -2.2 compare
carbon source Shikimic Acid 5 mM (C) +0.7 +2.2 compare
carbon source Cinnamic and Ethanols +0.8 +2.5 compare
r2a outgrowth control R2A outgrowth control +0.8 +2.6 compare
carbon source D-Lactate (C) +0.9 +2.5 compare
plant outgrowth control Plant outgrowth control +1.0 +3.2 compare