Fitness data for ABIE53_002685 in Paraburkholderia graminis OAS925

LysR family transcriptional regulator for bpeEF and oprC
SEED: Probable transcription regulator protein of MDR efflux pump cluster

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
stress M9 with Chloride 200 mM -1.1 -4.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.0 -3.6 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 -3.3 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -2.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.6 -2.2 compare
stress M9 with Chloride 200 mM -0.6 -2.2 compare
plant outgrowth control Plant outgrowth control -0.5 -2.3 compare
stress R2A with N-decanoyl-DL-Homoserine lactone 10 uM -0.5 -2.4 compare
stress R2A with N-decanoyl-DL-Homoserine lactone 10 uM -0.5 -2.4 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -1.8 compare
stress RCH2_defined_glucose_5mM with Ferulic Acid 5 mM -0.5 -2.2 compare
biofilm biofilm; planktonic cells from 96 well plate assay in R2A with C30 compound +0.5 +2.4 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.5 +2.0 compare
carbon source D-Sorbitol (C) +0.5 +2.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +1.9 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +2.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +2.4 compare
carbon source Acetylated xylan 10 g/L (C) +0.6 +2.3 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 +2.8 compare
biofilm biofilm; planktonic cells from 96 well plate assay in R2A with C30 compound +0.7 +3.3 compare