Fitness data for ABIE53_002439 in Paraburkholderia graminis OAS925

pilus assembly protein CpaE
SEED: Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly
KEGG: pilus assembly protein CpaE

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source L-Rhamnose (C) -1.0 -2.8 compare
carbon source Tween 20 (C) -0.9 -2.3 compare
carbon source Beta-Lactose (C) -0.8 -2.5 compare
carbon source L-Alanine (C) -0.8 -2.0 compare
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 0.5 mM -0.8 -1.3 compare
carbon source D-Galactose (C) -0.8 -2.0 compare
carbon source D,L-Lactate (C) -0.8 -3.1 compare
carbon source D-Glucose-6-Phosphate (C) -0.8 -2.6 compare
stress Growth in presence of pinene +0.8 +2.3 compare
carbon source Cinnamic and Ethanols +0.8 +2.3 compare
stress RCH2_defined_glucose_5mM with 4-Hydroxybenzoic Acid 5 mM +0.9 +3.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.9 +1.4 compare
stress M9 with Chloride 200 mM +0.9 +1.9 compare
stress R2A with Chloride 200 mM +0.9 +2.7 compare
stress control RCH2_defined_glucose_5mM with Dimethyl Sulfoxide 1 vol% +0.9 +3.9 compare
r2a outgrowth control R2A outgrowth control +1.0 +2.5 compare
r2a outgrowth control R2A outgrowth control +1.1 +2.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.1 +3.6 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.2 +2.3 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +1.5 +1.9 compare