Fitness data for ABIE53_002395 in Paraburkholderia graminis OAS925

DNA-binding GntR family transcriptional regulator
SEED: Transcriptional regulator, GntR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.5 -2.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.3 -1.9 compare
wm3064 conjugation control LB_DAP agar plate conjugation with WM3064, outgrowth in LB -1.1 -1.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.1 -2.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.1 -1.9 compare
nitrogen source histamine 5mM N source -1.1 -1.3 compare
carbon source L-Rhamnose (C) -1.0 -2.6 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.0 -2.1 compare
pH R2A pH 8.3 -1.0 -2.1 compare
carbon source pyruvate (C) -1.0 -2.7 compare
carbon source L-Alanine (C) -1.0 -1.9 compare
stress RCH2_defined_glucose_5mM with Shikimic Acid 5 mM -0.9 -3.0 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.9 -1.5 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 -1.4 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.9 +1.7 compare
carbon source Uridine (C) +0.9 +1.8 compare
stress R2A with Isopropyl alcohol 21 g/L +1.0 +1.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +1.0 +2.4 compare
stress M9 with 3-methyl-3-butenol 4.5 g/L +1.1 +2.8 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +1.2 +2.0 compare