Fitness data for ABIE53_002253 in Paraburkholderia graminis OAS925

AraC family transcriptional regulator
SEED: FIG024214: Transcriptional regulator, AraC family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM -1.1 -2.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 -2.2 compare
phage Burk1_100 -0.9 -2.9 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.9 -3.4 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 -2.1 compare
soil extract 4-Hydroxybenzoic Acid 5 mM in soil extract -0.8 -2.9 compare
r2a outgrowth control R2A outgrowth control -0.8 -2.3 compare
stress R2A with Chloride 200 mM -0.8 -2.6 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB -0.8 -2.7 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 -2.3 compare
soil extract 4-Hydroxybenzoic Acid 5 mM in soil extract -0.7 -2.9 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.7 -1.4 compare
carbon source D-Serine (C) -0.7 -2.0 compare
stress RCH2_defined_glucose_5mM with 4-Pyridoxic 5 mM -0.7 -2.3 compare
stress RCH2_defined_glucose_5mM with Adenine 2 mM -0.7 -1.6 compare
carbon source 4-Hydroxybenzoic Acid (C) +0.7 +2.6 compare
carbon source Acetylated xylan 10 g/L (C) +0.7 +2.0 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.7 +2.2 compare
carbon source Shikimic Acid 5 mM (C) +0.7 +2.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.8 +1.4 compare