Fitness data for ABIE53_002233 in Paraburkholderia graminis OAS925

LysR family transcriptional activator of nhaA
SEED: Cys regulon transcriptional activator CysB
KEGG: LysR family transcriptional regulator, transcriptional activator of nhaA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.7)


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group condition fitness t score  
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -4.2 -1.6 compare
stress R2A with Tricalcium phosphate 0.5 g/L -3.9 -2.5 compare
r2a no shaking R2A no shaking -3.8 -2.3 compare
carbon source Acetylated xylan 10 g/L (C) -3.3 -1.8 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.2 -3.0 compare
stress M9 with Chloride 200 mM -2.7 -2.5 compare
carbon source Shikimic Acid 5 mM (C) -2.7 -2.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -2.4 -1.6 compare
carbon source L-Tryptophan (C) -2.4 -2.4 compare
soil extract Serotonin 5 mM in soil extract -2.2 -1.9 compare
stress RCH2_defined_glucose_5mM with 2-Deoxy-D-glucose 5 mM -2.1 -2.2 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.0 -1.4 compare
stress M9 with PEG 6000 16 vol% -2.0 -2.6 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.9 -1.2 compare
carbon source 4-Hydroxybenzoic Acid (C) -1.8 -2.5 compare
stress M9 with Chloride 200 mM -1.7 -1.6 compare
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.7 -1.2 compare
carbon source D-Galactose (C) -1.7 -2.2 compare
carbon source D-Gluconic Acid (C) -1.7 -1.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.9 +2.3 compare