Fitness data for ABIE53_002125 in Paraburkholderia graminis OAS925

DNA-binding transcriptional LysR family regulator
SEED: Transcriptional regulator, LysR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
carbon source Shikimic Acid 5 mM (C) -1.8 -3.1 compare
carbon source Laminarin 10 g/L (C) -1.8 -3.3 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.6 -2.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.6 -1.5 compare
carbon source Shikimic Acid 5 mM (C) -1.6 -2.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.4 -1.7 compare
carbon source Laminarin 10 g/L (C) -1.4 -3.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.4 -3.1 compare
plant outgrowth control Plant outgrowth control -1.3 -3.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.2 -2.7 compare
carbon source homovanillyl alcohol and Ethanols -1.2 -3.8 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.2 -2.2 compare
plant outgrowth control Plant outgrowth control -1.2 -3.3 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.1 -2.9 compare
m9 no stress control M9 no stress control +1.2 +4.7 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +1.2 +2.6 compare
stress M9 with 3-methyl-2-butenol 2 g/L +1.3 +5.6 compare
stress M9 with 3-methyl-2-butenol 2 g/L +1.4 +6.2 compare
stress M9 with 3-methyl-2-butenol 2 g/L +1.4 +5.7 compare
m9 no stress control M9 no stress control +1.6 +6.6 compare