Fitness data for ABIE53_002032 in Paraburkholderia graminis OAS925

Rrf2 family nitric oxide-sensitive transcriptional repressor
SEED: Nitrite-sensitive transcriptional repressor NsrR
KEGG: Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.2)


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group condition fitness t score  
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.1 -2.1 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.7 -5.1 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.6 -5.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.6 -4.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -2.6 -1.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.6 -3.5 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.5 -4.9 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -2.4 -2.3 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.3 -4.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -2.3 -2.7 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.3 -4.5 compare
stress M9 with 3-methyl-2-butenol 2 g/L -2.2 -4.5 compare
biofilm biofilm; planktonic cells from 96 well plate assay in R2A with C30 compound +3.0 +17.4 compare
biofilm biofilm; planktonic cells from 96 well plate assay in R2A with C30 compound +3.1 +17.6 compare
biofilm biofilm; attached cells from 96 well plate assay in R2A +3.4 +18.1 compare
biofilm biofilm; attached cells from 96 well plate assay in R2A +3.4 +20.4 compare
biofilm biofilm; planktonic cells from 96 well plate assay in R2A +4.6 +25.0 compare
biofilm biofilm; planktonic cells from 96 well plate assay in R2A +4.8 +27.0 compare
r2a no shaking R2A no shaking +4.9 +19.7 compare
r2a no shaking R2A no shaking +4.9 +18.0 compare