Fitness data for ABIE53_001939 in Paraburkholderia graminis OAS925

hypothetical protein
SEED: phage-related integrase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source Acetylated xylan 10 g/L (C) -1.1 -2.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.7 -2.3 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -2.1 compare
carbon source Shikimic Acid 5 mM (C) -0.6 -2.3 compare
carbon source Shikimic Acid 5 mM (C) -0.6 -2.4 compare
carbon source Laminarin 10 g/L (C) -0.6 -2.5 compare
r2a outgrowth control R2A outgrowth control -0.6 -3.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -1.8 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.5 -2.0 compare
biofilm biofilm; planktonic cells from 96 well plate assay in R2A -0.5 -2.8 compare
stress R2A with Tricalcium phosphate 0.5 g/L -0.5 -2.0 compare
carbon source D-Glucose (C) +0.5 +1.8 compare
stress M9 with 3-methyl-2-butenol 2 g/L +0.5 +2.5 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +2.1 compare
stress M9 with 3-methyl-2-butenol 2 g/L +0.5 +2.7 compare
soil extract caffeic 5 mM in soil extract +0.6 +3.0 compare
carbon source D-Mannose (C) +0.6 +2.5 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 +2.7 compare
stress M9 with Chloride 200 mM +0.7 +4.0 compare
carbon source D-Fructose (C) +0.8 +2.6 compare