Fitness data for ABIE53_001908 in Paraburkholderia graminis OAS925

DNA-binding transcriptional LysR family regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
carbon source Laminarin 10 g/L (C) -1.4 -3.2 compare
carbon source Acetylated xylan 10 g/L (C) -1.3 -2.4 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.3 -3.2 compare
stress M9 with Chloride 200 mM -1.3 -3.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.3 -2.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.2 -2.6 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.1 -2.4 compare
carbon source Shikimic Acid 5 mM (C) -1.1 -2.6 compare
stress M9 with Chloride 200 mM -1.1 -2.5 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.0 -2.8 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -1.0 -2.8 compare
plant outgrowth control Plant outgrowth control -1.0 -3.1 compare
r2a outgrowth control R2A outgrowth control -1.0 -3.5 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 -1.8 compare
stress R2A with Chloride 200 mM -0.9 -1.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.9 -2.5 compare
stress M9 with 3-methyl-2-butenol 2 g/L +0.9 +3.2 compare
stress M9 with 3-methyl-2-butenol 2 g/L +1.0 +4.1 compare
soil extract Indole-3-pyruvic 5 mM in soil extract +1.2 +3.3 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.7 +2.2 compare