Fitness data for ABIE53_001835 in Paraburkholderia graminis OAS925

LysR family glycine cleavage system transcriptional activator
SEED: Glycine cleavage system transcriptional activator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


Add gene:

Or see all 488 experiments or choose conditions

group condition fitness t score  
soil extract Indole-3-pyruvic 5 mM in soil extract -1.1 -3.3 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 -2.4 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 -2.3 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 -2.8 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.9 -2.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 -1.9 compare
soil extract Serotonin 5 mM in soil extract -0.8 -3.0 compare
r2a outgrowth control R2A outgrowth control -0.8 -2.2 compare
carbon source D-Gluconic Acid (C) +0.8 +1.9 compare
carbon source D-Galacturonic Acid (C) +0.8 +1.8 compare
carbon source Tween 20 (C) +0.8 +1.8 compare
carbon source D-Galactose (C) +0.8 +1.7 compare
carbon source D-Glucose-6-Phosphate (C) +0.9 +1.7 compare
carbon source D-Galacturonic Acid (C) +1.0 +2.2 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.0 +2.3 compare
carbon source D-Glucose (C) +1.0 +2.3 compare
carbon source D-Sorbitol (C) +1.1 +2.0 compare
carbon source m-Inositol (C) +1.1 +2.6 compare
carbon source L-Histidine (C) +1.1 +2.3 compare
carbon source D-Fructose (C) +1.4 +2.9 compare