Fitness data for ABIE53_001776 in Paraburkholderia graminis OAS925

c-di-GMP-related signal transduction protein
SEED: probable competence protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source L-Tryptophan (C) -0.8 -3.2 compare
stress R2A with Chloride 200 mM -0.8 -2.6 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -2.5 compare
mixed community Mixed culture; Alteromonas stellipolaris PQQ42 1:1 starting OD to Burkholderia -0.7 -2.8 compare
stress R2A with N-decanoyl-DL-Homoserine lactone 10 uM -0.7 -2.7 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -2.7 compare
carbon source Glucuronamide (C) -0.7 -2.4 compare
carbon source Pectin 10 g/L (C) -0.7 -2.5 compare
carbon source D-Glucose (C) +0.6 +2.1 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +2.3 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.7 +2.1 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 +2.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 +1.3 compare
r2a outgrowth control R2A outgrowth control +0.7 +2.7 compare
r2a outgrowth control R2A outgrowth control +0.7 +2.7 compare
carbon source Acetylated xylan 10 g/L (C) +0.7 +3.0 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.8 +2.2 compare
carbon source D-Fructose (C) +0.9 +3.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.9 +2.4 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.1 +3.0 compare