Fitness data for ABIE53_001752 in Paraburkholderia graminis OAS925

transcriptional regulator with XRE-family HTH domain
SEED: putative DNA-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.0 -3.1 compare
r2a outgrowth control R2A outgrowth control -0.8 -3.5 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 -2.6 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.8 -2.9 compare
r2a outgrowth control R2A outgrowth control -0.7 -2.3 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.7 -2.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -2.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.6 -2.5 compare
carbon source Inosine (C) -0.6 -2.2 compare
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 0.5 mM -0.6 -3.2 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.6 -1.7 compare
motility_chemotaxis Motility_chemotaxis, R2A; outer cut +0.5 +1.9 compare
soil extract Indole-3-pyruvic 5 mM in soil extract +0.5 +1.9 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +2.5 compare
nitrogen source Ammonium chloride 30 mM (N) +0.6 +2.8 compare
motility_chemotaxis Motility_chemotaxis, R2A; outer cut +0.6 +2.0 compare
carbon source Azelaic 20 mM (C) +0.6 +2.3 compare
carbon source Acetylated xylan 10 g/L (C) +0.7 +1.7 compare
motility_chemotaxis Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut +0.7 +2.8 compare
stress R2A with Abscisic 10 uM +0.7 +3.1 compare