Fitness data for ABIE53_001639 in Paraburkholderia graminis OAS925

NitT/TauT family transport system substrate-binding protein
SEED: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
carbon source Shikimic Acid 5 mM (C) -0.4 -2.6 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.4 -2.4 compare
carbon source Shikimic Acid 5 mM (C) -0.4 -2.5 compare
soil extract Chlorogenic 5 mM in soil extract -0.3 -1.7 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.2 +1.6 compare
stress RCH2_defined_glucose_5mM with Abietic Acid 5 mM +0.2 +1.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +1.7 compare
carbon source D-Glucuronic Acid (C) +0.3 +1.6 compare
soil extract Sucrose 5 mM in soil extract +0.3 +1.5 compare
stress M9 with Chloride 200 mM +0.3 +1.8 compare
phage Burk1_100 +0.3 +1.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +2.1 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.3 +1.8 compare
nitrogen source 1-aminocyclopropane-1-carboxylate (ACC) (N) +0.3 +2.7 compare
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +1.7 compare
stress R2A with Clay 500 g/L +0.4 +2.8 compare
r2a no shaking R2A no shaking +0.4 +2.7 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +2.3 compare
stress R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM +0.4 +2.6 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +2.5 compare