Fitness data for ABIE53_001154 in Paraburkholderia graminis OAS925

lipopolysaccharide transport system permease protein
SEED: O-antigen export system permease protein RfbD
KEGG: lipopolysaccharide transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
motility_chemotaxis Motility_chemotaxis, R2A; outer cut -2.1 -12.6 compare
motility_chemotaxis Motility_chemotaxis, R2A; outer cut -1.7 -8.6 compare
nitrogen source histamine 5mM N source -1.0 -6.6 compare
stress R2A with Clay 500 g/L -1.0 -6.5 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.9 -4.4 compare
nitrogen source histamine 5mM N source -0.9 -5.7 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.8 -4.5 compare
phage Burk2_1 +0.8 +6.7 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.8 +3.3 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.9 +5.7 compare
phage Burk2_1 +1.0 +8.9 compare
phage Burk1_10 +1.2 +9.3 compare
phage Burk1_10 +1.2 +10.2 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.3 +6.6 compare
phage Burk2_10 +1.6 +13.7 compare
phage Burk2_10 +1.6 +12.8 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.8 +9.8 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.9 +11.8 compare
phage Burk1_100 +2.2 +17.8 compare
phage Burk1_100 +2.2 +18.5 compare