Fitness data for ABIE53_001117 in Paraburkholderia graminis OAS925

diguanylate cyclase (GGDEF)-like protein
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
r2a no shaking R2A no shaking -0.2 -2.1 compare
r2a no shaking R2A no shaking -0.2 -2.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.2 -1.6 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.2 -1.5 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 -1.6 compare
stress RCH2_defined_glucose_5mM with Sucrose 5 mM -0.2 -1.4 compare
stress RCH2_defined_glucose_5mM with Adenine 5 mM -0.2 -1.5 compare
phage Burk1_100 -0.2 -1.5 compare
motility_chemotaxis Motility_chemotaxis, R2A; inner cut -0.2 -1.4 compare
carbon source L-Tryptophan (C) -0.2 -1.4 compare
stress R2A with Quartz_sand 500 g/L +0.2 +1.4 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +1.3 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +1.4 compare
stress RCH2_defined_glucose_5mM with caffeic 1 mM +0.2 +1.6 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.2 +1.6 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +1.7 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.2 +1.8 compare
stress R2A with Chloride 200 mM +0.2 +2.1 compare
motility_chemotaxis Motility_chemotaxis, R2A; outer cut +0.3 +2.7 compare
motility_chemotaxis Motility_chemotaxis, R2A; outer cut +0.5 +4.1 compare