Fitness data for ABIE53_000978 in Paraburkholderia graminis OAS925

3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit
SEED: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
KEGG: 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.8)


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group condition fitness t score  
r2a outgrowth control R2A outgrowth control -4.5 -2.8 compare
carbon source D-Xylose (C) -2.6 -1.9 compare
carbon source D,L-Malic Acid (C) -2.5 -2.6 compare
carbon source Shikimic Acid 5 mM (C) -2.5 -3.0 compare
nitrogen source histamine 5mM N source -2.2 -2.2 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.2 -1.8 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.1 -1.9 compare
carbon source D-Mannose (C) -2.0 -1.5 compare
carbon source D-Lactate (C) -2.0 -1.9 compare
carbon source D-Cellobiose (C) -1.9 -2.4 compare
carbon source succinate (C) -1.8 -2.4 compare
carbon source L-Arginine (C) -1.8 -1.7 compare
stress RCH2_defined_glucose_5mM with Serotonin 5 mM +1.8 +2.4 compare
in planta Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +1.8 +2.4 compare
stress RCH2_defined_glucose_5mM with Lumazine 5 mM +2.0 +2.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +2.4 +2.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +2.4 +2.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +3.5 +2.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +5.0 +2.3 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +5.0 +2.0 compare