Fitness data for ABIE53_000903 in Paraburkholderia graminis OAS925

homogentisate 1,2-dioxygenase
SEED: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
KEGG: homogentisate 1,2-dioxygenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source shik 5mM -1.0 -6.8 compare
carbon source shik 5mM -1.0 -6.3 compare
carbon source shik 20mM -0.9 -5.3 compare
carbon source Shikimic Acid 5 mM (C) -0.8 -5.0 compare
carbon source Shikimic Acid 5 mM (C) -0.8 -4.7 compare
carbon source shik 20mM -0.6 -3.6 compare
soil extract Shikimic Acid 5 mM in soil extract -0.5 -3.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -2.5 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -2.3 compare
carbon source casaminos (C) -0.4 -2.3 compare
soil extract Abietic Acid 5 mM in soil extract +0.4 +2.6 compare
carbon source D-Sorbitol (C) +0.4 +1.6 compare
carbon source L-Rhamnose (C) +0.4 +2.2 compare
carbon source D-Galactose (C) +0.4 +2.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +2.3 compare
carbon source D-Glucose-6-Phosphate (C) +0.4 +2.0 compare
carbon source L-Proline (C) +0.5 +2.6 compare
carbon source D-Fructose (C) +0.5 +1.8 compare
carbon source Xylitol (C) +0.5 +2.5 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +3.1 compare