Fitness data for ABIE53_000811 in Paraburkholderia graminis OAS925

8-oxo-dGTP pyrophosphatase MutT (NUDIX family)
SEED: NTP pyrophosphohydrolases including oxidative damage repair enzymes

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
soil extract Indole-3-pyruvic 5 mM in soil extract -1.0 -4.7 compare
nitrogen source histamine 5mM N source -1.0 -4.5 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.7 -3.9 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.6 -2.1 compare
soil extract Indole-3-pyruvic 5 mM in soil extract -0.5 -2.0 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -2.6 compare
soil extract Adenine 5 mM in soil extract -0.4 -2.1 compare
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 0.5 mM -0.4 -2.1 compare
m9 no stress control M9 no stress control -0.4 -2.4 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -1.6 compare
m9 no stress control M9 no stress control -0.4 -2.6 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +2.3 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +1.8 compare
stress RCH2_defined_glucose_5mM with caffeic 0.5 mM +0.5 +2.4 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +2.2 compare
carbon source Acetylated xylan 10 g/L (C) +0.5 +2.6 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +2.5 compare
stress RCH2_defined_glucose_5mM with Lumazine 5 mM +0.6 +2.3 compare
plant outgrowth control Plant outgrowth control +0.6 +2.7 compare
plant outgrowth control Plant outgrowth control +0.7 +3.0 compare