Fitness data for ABIE53_000758 in Paraburkholderia graminis OAS925

reactive intermediate/imine deaminase
SEED: Bona fide RidA/YjgF/TdcF/RutC subgroup

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.4)


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group condition fitness t score  
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.6 -1.3 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -2.4 -0.9 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -2.2 -1.1 compare
motility_chemotaxis Motility_chemotaxis, R2A; outer cut -2.0 -1.3 compare
r2a no shaking R2A no shaking -1.9 -1.8 compare
stress RCH2_defined_glucose_5mM with Adenine 5 mM -1.7 -1.6 compare
stress RCH2_defined_glucose_5mM with Lumazine 5 mM -1.7 -1.5 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.6 -1.0 compare
carbon source a-Ketoglutaric (C) -1.6 -1.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.6 -1.3 compare
stress RCH2_defined_glucose_5mM with Pyruvic 5 mM -1.6 -2.1 compare
stress RCH2_defined_glucose_5mM with L-Proline 5 mM -1.6 -2.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.6 -1.5 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.5 -1.2 compare
carbon source D-Trehalose (C) -1.4 -1.6 compare
stress R2A with N-(3-oxohexanoyl)-DL-homoserine lactone 10 uM -1.4 -1.8 compare
carbon source Trisodium citrate (C) -1.4 -1.5 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.6 +1.9 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.8 +2.1 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +2.6 +5.2 compare