Fitness data for ABIE53_000126 in Paraburkholderia graminis OAS925

two-component system chemotaxis response regulator CheY
SEED: Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY
KEGG: two-component system, chemotaxis family, response regulator CheY

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.5)


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group condition fitness t score  
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -4.0 -2.3 compare
motility_chemotaxis Motility_chemotaxis, R2A; outer cut -2.7 -2.7 compare
motility_chemotaxis Motility_chemotaxis, R2A; outer cut -2.4 -2.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -2.4 -2.3 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.9 -1.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.8 -1.8 compare
carbon source Acetylated xylan 10 g/L (C) -1.8 -2.9 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.8 -2.1 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -1.6 -2.5 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -1.5 -1.7 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.7 +4.7 compare
carbon source D-Gluconic Acid (C) +1.9 +4.1 compare
biofilm biofilm; attached cells from 96 well plate assay in R2A +2.3 +6.8 compare
biofilm biofilm; attached cells from 96 well plate assay in R2A +2.6 +8.1 compare
r2a no shaking R2A no shaking +3.1 +5.1 compare
biofilm biofilm; planktonic cells from 96 well plate assay in R2A with C30 compound +3.2 +9.1 compare
r2a no shaking R2A no shaking +3.3 +5.4 compare
biofilm biofilm; planktonic cells from 96 well plate assay in R2A with C30 compound +3.5 +9.0 compare
biofilm biofilm; planktonic cells from 96 well plate assay in R2A +3.5 +9.2 compare
biofilm biofilm; planktonic cells from 96 well plate assay in R2A +3.6 +7.9 compare