Fitness data for ABIE53_000065 in Paraburkholderia graminis OAS925

DNA-binding transcriptional LysR family regulator
SEED: LysR family regulatory protein CidR

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
stress M9 with Chloride 200 mM -0.9 -4.1 compare
carbon source butyrate (C) -0.6 -2.6 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.6 -2.8 compare
soil extract Lumazine 5 mM in soil extract -0.5 -2.4 compare
stress R2A with PEG 6000 16 vol% -0.5 -2.8 compare
stress M9 with Chloride 200 mM -0.5 -2.4 compare
carbon source D-Lactate (C) -0.4 -1.8 compare
soil extract Sucrose 5 mM in soil extract -0.4 -2.3 compare
carbon source succinate (C) -0.4 -2.3 compare
carbon source Glucuronamide (C) -0.4 -2.0 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent +0.4 +2.2 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +2.3 compare
carbon source D-Fructose (C) +0.4 +1.4 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.4 +2.0 compare
carbon source Citric Acid 20 mM (C) +0.5 +2.8 compare
nitrogen source Ammonium chloride 30 mM (N) +0.5 +3.1 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +1.9 compare
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 +2.4 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.8 +3.7 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.8 +3.2 compare